W86F/W86A突变对细菌视紫红质光循环影响的差异性分析

细菌视紫红质(bacteriorhodopsin,bR)是一种光驱受体蛋白,每个活性单元由3个单体组成,每个单体由一分子视蛋白和一分子的视黄醛发色团共价结合而成,其功能为从胞内向胞外定向传输质子,利用形成的质子浓度梯度将光能转化为化学能.光照后视黄醛发色团构型发生all-trans向13-cis转变,蛋白的构象也随之发生了一系列具有稳定中间态的变化并驱动质子的定向传递.为探讨bR视黄醛键合区保守性氨基酸色氨酸86 (Tryptop-han86,w86)对其光循环中间态和质子泵功能的影响,本研究采用定点突变技术将W86突变为侧链大小不同的F86和A86,通过原位紫外-可见光吸收光谱、闪光光解光谱、pH滴定、固体核磁共振等技术手段,探究W86F和W86A突变对bR光循环及质子泵功能影响差异性的分子机制.结果 表明,W86F和W86A突变均造成了bR暗适应状态下视黄醛顺反异构平衡向顺式构型占优的方向移动,且W86F突变可造成反式构型的完全消失.此外,无论是W86F还是W86A突变都造成了蛋白光循环中间态的减弱且衰减延长,以及质子泵功能减弱,但影响机制各有所不同,这可能与这两个突变对视黄醛多烯链上电子云的分布以及周围残基造成的扰动程度不同有关.     

一株中温淀粉酶菌株的分离鉴定及其产酶条件分析

利用固体淀粉筛选培养基,从安阳市郊区面粉厂附近的土壤里分离筛选出1株产淀粉酶的菌株,编号为MF-3-2.经过菌株形态、革兰氏染色、16S rDNA鉴定及系统进化树分析,初步确定其为枯草芽孢杆菌(Bacillus subtilis).摇瓶培养后对其酶学性质研究发现,该菌株淀粉酶的最适温度为65℃,最适pH值为6.0,在pH值4.8～6.0范围内仍能残余70％以上的酶活力.该菌株的最适生长温度为40℃,最适生长pH值为6.5.产酶条件优化结果表明:最适碳源为马铃薯淀粉,最适氮源为豆粕粉,最适碳氮比为1∶15,发酵温度30℃,发酵pH值6.0,装液量10％,种龄10h,接种量5％,转速200 r/min,48 h达到产酶高峰.通过发酵产酶条件优化,其淀粉酶活性达到86.8 U/mL,是优化前的35倍.另外,在酸性条件下还具有较好的活性.因此,该菌株的淀粉酶具有潜在的工业应用前景.     

肺炎链球菌感染早期IFN-β通过调节巨噬细胞炎症反应保护宿主

该文旨在探讨干扰素-β(interferon-β,IFN-β)在肺炎链球菌(Streptococcus pneumoniae,S.pn)感染早期对宿主炎症免疫的影响。使用外源重组IFN-β蛋白(recombinant IFN-β,rIFN-β)预处理WT小鼠及其腹腔渗出巨噬细胞(peritoneal exudate macrophages,PEMs),以培养基处理组作为对照。同时应用内源干扰素α/β受体(interferonα/βreceptor,IFNAR)缺陷的小鼠以及PEMs,以WT组为对照。各组分别暴露于D39菌株后,通过RT-PCR和ELISA检测白细胞介素-1β(interleukin-1β,IL-1β)、肿瘤坏死因子-α(tumor necrosis factor-α,TNF-α)的表达水平,并通过小鼠肺切片HE染色和肺干/湿重比评估其肺部炎症浸润和组织损伤,以分析IFN-β对宿主炎症反应的影响;为分析细菌清除率,对小鼠巨噬细胞系RAW264.7行吞噬实验、计数小鼠肺部细菌载量,最后通过小鼠生存率分析确认IFN-β对宿主抵抗S.pn的影响。结果表明,IFN-β抑制D39诱导的IL-1β和TNF-α的过度表达。与NC组比,rIFN-β预处理提高RAW264.7细胞对S.pn的吞噬能力(P<0.001),降低感染小鼠的肺部细菌负荷(P<0.01)和肺损伤评分(P<0.05)。而IFNAR–/–感染小鼠肺部菌载量相较于WT小鼠显著升高(P<0.001),持续更高水平的局部炎症反应导致其肺组织损伤加重且在9天内死亡率明显增加(P<0.05)。但各组小鼠体质量、肺干/湿重比和脾指数值差异无显著性(P>0.05)。可见,在S.pn感染早期,IFN-β通过调节巨噬细胞中促炎细胞因子的表达而维持适度的局部炎症反应,有助于宿主清除细菌,防止局部感染进展为致死性感染。     

Longitudinal virological changes and underlying pathogenesis in hospitalized COVID-19 patients in Guangzhou,China

Science China Life Sciences - Prolonged viral RNA shedding and recurrence of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) in coronavirus disease 2019 (COVID-19) patients have been...     

A botanical medicine dragon’s blood exhibited clinical antithrombosis efficacy similar to low molecular weight heparin

Deep vein thrombosis(DVT) is a common complication following traumatic fracture with a 0.5%–1% annual incidence. Low molecular weight heparin(LMWH) is the most commonly used anticoagulation drug for DVT prevention, but treatment with LMWH is invasive. Our aim is to compare the antithrombotic effect of dragon's blood, an oral botanical anticoagulant medicine approved by the Chinese FDA, with LMWH in patients undergoing hip fracture surgery and to explore the molecular mechanisms of anticoagulation treatment. Our study recruited patients and divided them into LMWH and dragon's blood treatment group. Coagulation index tests, Doppler ultrasound and m RNA sequencing were performed before and after anticoagulation therapy. There was no significant difference in postoperative DVT incidence between the two groups(23.1% versus 15.4%,P=0.694). D-dimer(D-D) and fibrinogen degradation product(FDP) showed significant reductions in both groups after anticoagulation treatments. We identified SLC4 A1, PROS1, PRKAR2 B and seven other genes as being differentially expressed during anticoagulation therapy in both groups. Genes correlated with coagulation indexes were also identified. Dragon's blood and LMWH showed similar effects on DVT and produced similar gene expression changes in patients undergoing hip fracture surgery, indicating that dragon's blood is a more convenient antithrombosis medicine(oral) than LMWH(hypodermic injection).     

增温、施肥与种内竞争的交互作用对云杉根系属性的影响

增温、施肥与种内竞争的交互作用对云杉根系属性的影响 物种竞争、气温和土壤养分是青藏高原东部高寒地区影响树木生长的重要因素。虽然已开展了大量关于物种竞争、气温、施肥单因素对树木生长的影响研究,但关于这三者的交互作用对根系生长的影响还知之甚少。因此,本研究拟通过测量根系属性(细根长、根表面积、比根长、比表面积、根尖数、根系分支数等)、根生物量,以及根系养分吸收,研究施肥和增温对物种竞争的影响,并进一步探讨施肥、增温与物种竞争的交互作用对云杉(Picea asperata)生长的影响机制以及所采取的适应策略。研究结果表明,增温、施肥和竞争均提高了细根的氮、钾浓度,但并未影响细根生物量和根长、根表面积、根尖数和根分支数等根系特征。然而,无论是增温、施肥,或是它们的联合作用,与物种竞争进行交互时,均增加了根长、根表面积、根尖数、根系分支数和养分吸收。此外,施肥降低了根比表面积、比根长和单位面积的根尖数和根分支数,增温和竞争的交互作用使根比表面积、比根长下降,其他参数不受温度和竞争的影响。该结果表明,云杉在物种竞争、气候变暖、施肥及其交互作用下保持着保守的营养策略。该研究加强了对树木应对全球变化的生理和生态适应性的理解。     

Evaluation of the efficacy and safety of hydroxychloroquine in comparison with chloroquine in moderate and severe patients with COVID-19

Science China Life Sciences -     

Re-detectable positive SARS-CoV-2 RNA tests in patients who recovered from COVID-19 with intestinal infection

Dear Editor,Severe acute respiratory syndrome coronavirus 2(SARSCoV-2),a novel coronavirus that causes Coronavirus Disease 2019(COVID-19)(Yang and Wang,2020),has spread to more than 200 countries and infected more than 9,000,000 people as of Jun 2020.Tens of thousands of patients with COVID-19 have recovered and been discharged from hospital.However,there are reports of recovered patients who subsequently tested positive for SARSCoV-2 after discharge(re-detectable positive,RP)(An et al.,2020;Lan et al.,2020),and this has led to increasing focus on the mechanism(s)underlying RP.     

Unexpected guests in the tumor microenvironment:microbiome in cancer

Although intestinal microbiome have been established as an important biomarker and regulator of cancer development and therapeutic response,less is known about the role of microbiome at other body sites in cancer.Emerging evidence has revealed that the local microbiota make up an important part of the tumor microenvironment across many types of cancer,espe-cially in cancers arising from mucosal sites,including the lung,skin and gastrointestinal tract.The populations of bacteria that reside specifically within tumors have been found to be tumor-type specific,and mechanistic studies have demonstrated that tumor-associated microbiota may directly regulate cancer initiation,pro-gression and responses to chemo-or immuno-thera-pies.This review aims to provide a comprehensive review of the important literature on the microbiota in the cancerous tissue,and their function and mechanism of action in cancer development and treatment.